WebbAckerlyKembel2008

Référence

Webb, C.O., Ackerly, D.D. and Kembel, S.W. (2008) Phylocom: Software for the analysis of phylogenetic community structure and trait evolution. Bioinformatics, 24(18):2098-2100. (Scopus )

Résumé

Motivation: The increasing availability of phylogenetic and trait data for communities of co-occurring species has created a need for software that integrates ecological and evolutionary analyses. Capabilities: Phylocom calculates numerous metrics of phylogenetic community structure and trait similarity within communities. Hypothesis testing is implemented using several null models. Within the same framework, it measures phylogenetic signal and correlated evolution for species traits. A range of utility functions allow community and phylogenetic data manipulation, tree and trait generation, and integration into scientific workflows. © The Author 2008. Published by Oxford University Press. All rights reserved.

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@ARTICLE { WebbAckerlyKembel2008,
    AUTHOR = { Webb, C.O. and Ackerly, D.D. and Kembel, S.W. },
    TITLE = { Phylocom: Software for the analysis of phylogenetic community structure and trait evolution },
    JOURNAL = { Bioinformatics },
    YEAR = { 2008 },
    VOLUME = { 24 },
    PAGES = { 2098-2100 },
    NUMBER = { 18 },
    ABSTRACT = { Motivation: The increasing availability of phylogenetic and trait data for communities of co-occurring species has created a need for software that integrates ecological and evolutionary analyses. Capabilities: Phylocom calculates numerous metrics of phylogenetic community structure and trait similarity within communities. Hypothesis testing is implemented using several null models. Within the same framework, it measures phylogenetic signal and correlated evolution for species traits. A range of utility functions allow community and phylogenetic data manipulation, tree and trait generation, and integration into scientific workflows. © The Author 2008. Published by Oxford University Press. All rights reserved. },
    COMMENT = { Cited By (since 1996): 189 Export Date: 17 September 2012 Source: Scopus CODEN: BOINF doi: 10.1093/bioinformatics/btn358 },
    ISSN = { 13674803 (ISSN) },
    KEYWORDS = { article, community structure, computer program, data analysis, genetic similarity, genetic trait, molecular evolution, molecular phylogeny, phylogenetic tree, priority journal, species coexistence, Algorithms, Computational Biology, Evolution, Molecular, Models, Genetic, Phylogeny, Software },
    OWNER = { Luc },
    TIMESTAMP = { 2012.09.17 },
    URL = { http://www.scopus.com/inward/record.url?eid=2-s2.0-51749095104&partnerID=40&md5=ee466e152fdb1f9656691cb1e94ad8c6 },
}

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